Current members

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Clothilde Chenal, PhD candidate.
«  Impact of genome-wide variations and TEs in mosquitoes using pangenomics approaches » Co-supervised with François Sabot (IRD), Frederic Simard (MIVEGEC) and Michael Fontaine (MIVEGEC).
Keywords: TE, NGS, structutal variant, annotation, pangenomics, adaptation.

Sans titre

Yasmine Mansour, PhD candidate.
« Assessing the impact of TEs on the structure, evolution, and adaptation of mosquitoe genomes » Co-supervised with Annie Chateau (LIRMM – MAB).
Keywords: Recombination, TE annotation, evolution, NGS, genome assembly, graphs.

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Marion Varoqui, Master student, master BCD.
« Monitoring of transposable element insertions over generations ».
Keywords: TE, evolution, genomics, NGS.

 

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Corentin Marco, Master student, master BCD.
« Study of the TE dynamics in Anopheles Cameroon populations ».
Keywords: TE, NGS, structutal variant, annotation.

 

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Thibaud Marin, undergraduate student.
« Detection and annotation of TE variants in Anopheles pangenomes ».
Keywords: TE, NGS, structutal variant, annotation.

 

Former members

  • Fanny Touchard, Master student, M2 B2E – Darwin, currently PhD candidate.
  • Matthieu Fournel, Master student, M2 BCD.
  • Emira Cherif, Post-doc, currently Post-doc at ISEM.
  • Jean-Loup Claret, Master student, M2 B2E – Darwin, currently PhD candidate.
  • Julien Denozi, Master student, M1 BCD/EMA.
  • Edouard Delanoé, Master student, M1 BCD/EMA.
  • Rémy Costa – Master Student, M1 BCD.
  • Mickael Hamouma – Master Student, M1 BCD, currently computer science.
  • Laura Helou – Master Student, M2 BCD, currently PhD candidate.
  • Bridlin Barckmann, Post-doc, currently Post-doc at IGH.
  • Pascal Milesi*, EVAS-ISEM PhD candidate – defense in 2016, currently Assistant Professor at Uppsala University.
  • Benoit Assosgba*, EVAS-ISEM PhD candidate – defense in 2016, currently Post-doc at Abomey-Calavi University, Gambia, since 2017.
  • Quentin Testard, Master Student, M1 BCD, currently PhD candidate (CIFRE).
  • Timothée Virgoulay, Undergraduate Student, currently PhD candidate.
  • Nicolas Pompidor, Undergraduate Student, currently PhD candidate.
  • Rajiv McCoy, Stanford PhD Student – currently Assistant Professor @ The Johns Hopkins University.
  • Emilie Dumas*, EVAS-ISEM PhD student – defense in 2013, currently Post-doc at ESE, Gif-sur-Yvette, France since 2015.
  • Dave Tushar, Undergraduate Student.
  • Mauricio Barentos, Undergraduate Student.
    currently PhD candidate at Karolinska Institutet in Sweden.
  • Lokitha Vippala, Undergraduate Student.
  • Maité Barrón, Barbadilla lab PhD student- visiting Petrov Lab – defense in  2015, currently Post-doc at  CSIC-Universitat Pompeu Fabra, González lab.
  • Matthew Carrigan, Undergraduate Student, currently Post-doc at Trinity college.

(*) Bioinformatic introduction training only.

Quentin Testard, Timothée Virgoulay, Bridlin Barckmann and ASFL
Yasmine Mansour and ASFL